Package index
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download_reference() - Download Reference Files from GENCODE
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is_deg_sig() - Annotate Transcripts with Differential Gene Expression Significance
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join_DEG_DET() - Merge Gene and Transcript Level Differential Expression Tables
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make_tx_to_gene() - Create Transcript-to-Gene Relationship Table
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plot_log2FC() - Plot Log2 Fold-Change Results for Selected Genes
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plot_tx_context() - Plot Transcript Genomic Context
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plot_tx_expr() - Plot Transcript per gene expression
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prepare_annotation() - Prepare Annotation
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prepare_exon_annotation() - Prepare Exon based Position Annotation Table
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prepare_profile_data() - Prepare Data for Gene and Transcript Expression Profile Plot
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run_enrichment() - Run Gene Set Enrichment Analysis for Different Transcript Types