Changelog

Source: NEWS.md

isoformic v0.1.0.900* Development Version

Reference and Annotation

• download_reference(): now supports organism = c("human", "mouse"), with organism = "human" being the default.
• download_reference(): argument file_type = "gtf" is the default.
• prepare_annotation(): Parse both GTF and GFF file formats into required annotation data.

Differential Expression Analysis

• created run_swish_pairwise() function.

isoformic v0.1.0

• Initial support for SummarizedExperiment and MultiAssayExperiment.

isoformic v0.0.1

• Release of the initial workflow.