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Transcript Type Color Palette

Source: R/tx_type_palette.R
tx_type_palette.Rd

Default colour palette for transcript types: the GENCODE/Ensembl biotypes used by the workflow, the gene level, generic labels for annotations without biotypes (unknown, novel) and the SQANTI3 structural categories assigned by add_sqanti_classification() to long-read transcript catalogs.

Usage

tx_type_palette()

Value

A named character vector of hexadecimal colours.

Examples

head(tx_type_palette())
#>                           gene                 protein_coding 
#>                      "#fb8072"                      "#a6d854" 
#>                retained_intron protein_coding_CDS_not_defined 
#>                      "#8da0cb"                      "#fc8d62" 
#>        nonsense_mediated_decay                         lncRNA 
#>                      "#66c2a5"                      "#e78ac3"