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Prepare Exon based Position Annotation Table

Source: R/prepare_exon_annotation.R
prepare_exon_annotation.Rd

Prepare Exon based Position Annotation Table

Usage

prepare_exon_annotation(gene_name, file_path, file_type = c("gff", "gtf"))

Arguments

gene_name

String or vector of gene names to extract.

file_path

Path to annotation file.

file_type

A character string specifying the type of file to download. Valid options are "gff", "gtf", "fasta" or "genome_fasta". Defaults to "gff". Note: "fasta" refers to the transcriptome FASTA file. "genome_fasta" refers to the whole genome sequence FASTA file.